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Last update:
May 26, 2023
08:28 +1GMT
Sequence name
Sequence
Algorithm
NCBI blastp (2.2.18)
FASTA
SSEARCH
Database
Allergome
Uniprot
% Identity (BLAST)
% Similarity (FASTA)
min
max
Advanced options
Matrix:
PAM30
PAM70
BLOSUM80
BLOSUM62
BLOSUM45
Gap costs:
Open:9 Ext:2
Open:8 Ext:2
Open:7 Ext:2
Open:12 Ext:1
Open:11 Ext:1
Open:10 Ext:1
Expect threshold
00.1
0.1
1
10
100
1000
10000
30000
Short queries
Automatically adjust parameters for short input sequences
Filter
Low complexity regions
Word size
2
3
ktup:
1
(more sensitive)
2
(faster)
Matrix:
BLOSUM50
BLOSUM62
BLOSUM80
PAM120
PAM250
MDM10
MDM20
MDM40
Gap open:
-23
-22
-18
-17
-16
-14
-12
-10
-8
-7
-6
-2
-0
Gap extend:
0
-1
-2
-3
-4
-6
-8
Expectation upper value
1e-600
1e-300
1e-600
1e-50
1e-10
1e-5
0.001
0.1
1.0
2.0
5.0
10.0
20.0
50
Expectation lower value
default
1e-600
1e-300
1e-600
1e-50
1e-10
1e-5
0.001
0.1
1.0
2.0
5.0
10.0
20.0
50
Filter
none
seg
xnu
seg+xnu
Statistical model
Regress
MLE
Altshul-Gish
Regress/shuf.
MLE/shuf.
Matrix:
BLOSUM50
BLOSUM62
BLOSUM80
PAM120
PAM250
MDM10
MDM20
MDM40
Gap open:
-23
-22
-18
-17
-16
-14
-12
-10
-8
-7
-6
-2
-0
Gap extend:
0
-1
-2
-3
-4
-6
-8
Expectation upper value
1e-600
1e-300
1e-600
1e-50
1e-10
1e-5
0.001
0.1
1.0
2.0
5.0
10.0
20.0
50
Expectation lower value
default
1e-600
1e-300
1e-600
1e-50
1e-10
1e-5
0.001
0.1
1.0
2.0
5.0
10.0
20.0
50
Filter
none
seg
xnu
seg+xnu
Statistical model
Regress
MLE
Altshul-Gish
Regress/shuf.
MLE/shuf.
Max target sequences
10
50
100
250
500
Exclude Allergome molecules
Allergome 2003-2015
Developed by
Panservice
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